| Pos. | Equipe | Qat | Jap | Esp | Fra | Ita | Esp | Ned | Usa | All | Gbr | Cze | Usa | Smr | Por | Aus | Mal | Esp | Total |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | Honda Scot 250 | 24 | 0 | 31 | 18 | 17 | 27 | 31 | 0 | 168 | 34 | 23 | 25 | 21 | 0 | 419 | |||
| 2 | Aprilia Aspar | 25 | 0 | 25 | 13 | 20 | 27 | 5 | 0 | 131 | 31 | 23 | 29 | 27 | 0 | 356 | |||
| 3 | Gilera Metis | 7 | -7 | 23 | 41 | 26 | 0 | 27 | 0 | 148 | 16 | 36 | 36 | 0 | 0 | 353 | |||
| 4 | Yamaha Factory | 36 | 9 | 0 | 50 | 36 | 20 | 70 | -115 | 0 | 11 | 0 | 115 | 45 | 0 | 277 | |||
| 5 | Aprilia Aspar 125 | 7.5 | 0 | 0 | 0 | 30 | 26 | 0 | 0 | 108.5 | 0 | 40 | 32 | 0 | 0 | 244 | |||
| 6 | Pepe World Team | 25 | -20 | 13 | 5 | 11 | 16 | 20 | 0 | 81 | 8 | 9 | 12 | 25 | 0 | 205 | |||
| 7 | Aprilia Toth | 0 | 16 | 10 | 0 | 25 | 13 | 0 | 0 | 64 | 16 | 20 | 0 | 20 | 0 | 184 | |||
| 8 | Yamaha Tech3 | 13 | -2 | 0 | 28 | 19 | 0 | 35 | -47 | 0 | 30 | 0 | 57 | 6 | 0 | 139 | |||
| 9 | Honda PTT | 5 | -5 | 2 | 20 | 8 | 6 | 8 | 0 | 54 | 6 | 6 | 8 | 7 | 0 | 125 | |||
| 10 | Ducati MotoGP | 29 | -16 | 0 | 32 | 29 | 5 | 41 | -63 | 0 | 3 | 0 | 61 | 0 | 0 | 121 | |||
| 11 | Aprilia Blusens 250 | 2 | 9 | 0 | 0 | 9 | 11 | 10 | 0 | 61 | 10 | 0 | 0 | 9 | 0 | 121 | |||
| 12 | Aprilia WRB | 5.5 | 0 | 0 | 0 | 20 | 0 | 0 | 0 | 38.5 | 0 | 25 | 29 | 0 | 0 | 118 | |||
| 13 | Derbi Belson | 6.5 | 0 | 0 | 0 | 13 | 0 | 0 | 0 | 46.5 | 0 | 17 | 33 | 0 | 0 | 116 | |||
| 14 | Suzuki MotoGP | 9 | 6 | 10 | 24 | 17 | 0 | 35 | -51 | 0 | 8 | 0 | 40 | 18 | 0 | 116 | |||
| 15 | Aprilia Emmi | 10 | -2 | 11 | 0 | 13 | 10 | 0 | 0 | 50 | 7 | 0 | 7 | 6 | 0 | 112 | |||
| 16 | Honda Gresini | 17 | -13 | 0 | 20 | 3 | -5 | 19 | -23 | 0 | 13 | 0 | 58 | 10 | 0 | 99 | |||
| 17 | Auto Kelly - CP | 3 | 6 | 3 | 9 | 0 | 4 | 4 | 0 | 33 | 4 | 4 | 9 | 0 | 0 | 79 | |||
| 18 | Aprilia Cardion | 0 | 7 | 0 | 4 | 3 | 8 | 9 | 0 | 31 | 2 | 0 | 6 | 5 | 0 | 75 | |||
| 19 | Kawasaki Racing | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 35 | 9 | 0 | 14 | 8 | 0 | 66 | |||
| 20 | Honda Thaï | 8 | -8 | 1 | 11 | 2 | 9 | 7 | 0 | 30 | 0 | 5 | 0 | 0 | 0 | 65 | |||
| 21 | Ducati Pramac | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 21 | 14 | 0 | 16 | 12 | 0 | 63 | |||
| 22 | KTM 125 | 3.0 | 0 | 0 | 0 | 14 | 0 | 0 | 0 | 24 | 0 | 8 | 10 | 0 | 0 | 59 | |||
| 23 | Aprilia I.C. | 12.5 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 22.5 | 0 | 16 | 7 | 0 | 0 | 59 | |||
| 24 | Aprilia Emmi 125 | 8.0 | 0 | 0 | 0 | 6 | 0 | 0 | 0 | 24 | 0 | 10 | 0 | 0 | 0 | 48 | |||
| 25 | Honda LCR | 6 | -1 | 0 | 15 | 8 | -5 | 22 | -30 | 0 | 16 | 0 | 13 | 4 | 0 | 48 | |||
| 26 | Aprilia Kiefer | 4.0 | 0 | 0 | 0 | 8 | 0 | 0 | 0 | 12 | 0 | 9 | 9 | 0 | 0 | 42 | |||
| 27 | Kawasaki Hayate | 2 | 8 | 0 | 31 | 5 | -9 | 16 | -18 | 0 | 0 | 0 | 0 | 0 | 0 | 35 | |||
| 28 | Aprilia Lotus | 0 | 0 | 0 | 0 | 0 | 0 | 13 | 0 | 22 | 0 | 0 | 0 | 0 | 0 | 35 | |||
| 29 | Aprilia WTR | 1 | -1 | 0 | 0 | 5 | 3 | 3 | 0 | 16 | 0 | 0 | 4 | 3 | 0 | 34 | |||
| 30 | CIP Moto-GP250 | 4 | 2 | 4 | 0 | 0 | 0 | 0 | 0 | 13 | 1 | 3 | 0 | 4 | 0 | 31 | |||
| 31 | KTM 250 | 10.0 | 0 | 0 | 0 | 16 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 26 | |||
| 32 | Aprilia San Marino | 0.5 | 0 | 0 | 0 | 10 | 0 | 0 | 0 | 10.5 | 0 | 5 | 0 | 0 | 0 | 26 | |||
| 33 | Aprilia Toth | 0 | 3 | 0 | 7 | 1 | 0 | 1 | 0 | 12 | 0 | 0 | 0 | 0 | 0 | 24 | |||
| 34 | Aprilia Blusens 125 | 1.5 | 0 | 0 | 0 | 9 | 0 | 0 | 0 | 10.5 | 0 | 3 | 0 | 0 | 0 | 24 | |||
| 35 | Humangest Racing Team 125cc | 0 | 0 | 0 | 0 | 0 | 0 | 22 | -22 | 22 | 0 | 0 | 0 | 0 | 0 | 22 | |||
| 36 | Balaton Racing Team 250cc | 6 | 7 | 9 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 22 | |||
| 37 | KTM Red Bull | 5.0 | 0 | 0 | 0 | 2 | 0 | 0 | 0 | 7 | 0 | 4 | 4 | 0 | 0 | 22 | |||
| 38 | Ducati Pramac | 8 | 2 | 0 | 1 | 10 | 7 | 2 | -9 | 0 | 0 | 0 | 0 | 0 | 0 | 21 | |||
| 39 | Aprilia Molenaar | 3.5 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 11.5 | 0 | 0 | 5 | 0 | 0 | 20 | |||
| 40 | Derbi Ajo | 2.5 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 9.5 | 0 | 0 | 6 | 1 | 0 | 19 | |||
| 41 | KTM Aran | 0 | 0 | 0 | 0 | 4 | 0 | 0 | 0 | 10 | 0 | 0 | 2 | 0 | 0 | 16 | |||
| 42 | Honda France | 0 | 0 | 0 | 3 | 0 | 0 | 2 | 0 | 5 | 0 | 1 | 3 | 2 | 0 | 16 | |||
| 43 | Honda Kiefer | 0 | 1 | 0 | 6 | 0 | 0 | 0 | 0 | 7 | 0 | 0 | 1 | 0 | 0 | 15 | |||
| 44 | RCGM | 0 | 0 | 0 | 0 | 7 | 0 | 0 | 0 | 7 | 0 | 0 | 0 | 0 | 0 | 14 | |||
| 45 | Aprilia Matteoni | 20 | -20 | 8 | 0 | 0 | 5 | 0 | 0 | 15 | 5 | 8 | 0 | -28 | 0 | 13 | |||
| 46 | Honda HRC | 16 | -6 | 0 | 0 | 0 | 0 | 0 | 59 | -59 | 0 | 0 | 0 | 0 | 0 | 10 | |||
| 47 | Aprilia Toni Mang | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 4 | 0 | 3 | 0 | 0 | 0 | 7 | |||
| 48 | Wildcard | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 4 | 0 | 0 | 3 | 0 | 0 | 7 | |||
| 49 | Honda Scot | 1 | -1 | 0 | 7 | 0 | -4 | 5 | -5 | 0 | 0 | 0 | 1 | 0 | 0 | 4 | |||
| 50 | Aprilia BQR | 0 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 0 | 0 | 0 | 0 | 0 | 4 | |||
| 51 | Ducati Onde 2000 | 3 | -3 | 0 | 5 | 0 | -4 | 8 | -9 | 0 | 0 | 0 | 3 | 0 | 0 | 3 | |||
| 52 | BM Groundworks Yamaha | 0 | 0 | 0 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 2 | |||
| 53 | C&L Racing | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 0 | 0 | 0 | 0 | 0 | 2 | |||
| 54 | Aprilia Madrid | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 2 | |||
| 55 | Racing Team Germany | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 1 | |||
| 56 | Aspar Junior | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | |||
| 57 | Honda | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | |||
| 58 | Honda Abbink Bos | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | |||
| 59 | Junior GP Racing Dream | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | |||
| 60 | KRP | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | |||
| 61 | Loncin | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | |||
| 62 | Nordgren Racing | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | |||
| 63 | Pesek Tema Aprilia | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | |||
| 64 | SP 125 Racing/Mackrory Demolition | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | |||
| 65 | Test | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |